Insertion junction: CLIP2.076447_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076447
Chromosome:chromosome 17
Location:3623540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725301 (1 of 3) IPR000504//IPR003954 - RNA recognition motif domain // RNA recognition motif domain, eukaryote 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTAGCAAGCTCACTACGGCCACGTGAACACATCTACCGGGATACGCC
Internal bar code:GTCATGCTGTATTCCGTGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3234
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGAGTGCATGTTACCGTT
Suggested primer 2:TGTCCTGTTACCGCAGACAC