Insertion junction: CLIP2.076447_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076447
Chromosome:chromosome 17
Location:3623543
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725301 (1 of 3) IPR000504//IPR003954 - RNA recognition motif domain // RNA recognition motif domain, eukaryote 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACAGACAGTACCCACGCTACCAATGTGTACGTTTCAGGGGCTCCATA
Internal bar code:GTGACACTATTAGATGCATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5744
LEAP-Seq percent confirming:91.358
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCTGTTACCGCAGACAC
Suggested primer 2:ACCGAGTGCATGTTACCGTT