Insertion junction: CLIP2.076455_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.076455
Chromosome:chromosome 9
Location:3329722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395399 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCTACCAGAGCAGAGCCTGGTGGCATAGGTTAGGGGTGCAGTAGGGGG
Internal bar code:CCTGGGTACTCGGTGTTTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:674
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTTGTCACGGAGTCACG
Suggested primer 2:CGAGTATGAGGACGACGTGG