Insertion junction: CLIP2.076465_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076465
Chromosome:chromosome 3
Location:2101834
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156550 (1 of 1) PTHR22829//PTHR34826 - DEP DOMAIN PROTEIN // FAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAAAGGTGGGAAAGGCAAGCCGTGTATGCAAGGGAGCAGAGATAAGAAA
Internal bar code:GCGATCATTAGGTTAGGCCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1502
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CATTTGGCACTGTGGGTGTG
Suggested primer 2:AGATGAGTTGGTTGCGGAGG