Insertion junction: CLIP2.076480_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076480
Chromosome:chromosome 12
Location:4630404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522050 (1 of 1) PTHR11851//PTHR11851:SF140 - METALLOPROTEASE // SUBFAMILY NOT NAMED 5'UTR
Cre12.g522100 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGCTGTATCTAACGTGAACTTGGGGGTTGCCCACACTTCCAAGAAAA
Internal bar code:GGTGAATTCCGAGACTAAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1678
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGGACGCAAGGTACTGG
Suggested primer 2:TCACTGTGGTGTACTTGGGC