Insertion junction: CLIP2.076485_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076485
Chromosome:plastome
Location:61798
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802289 ChreCp025,rps14,2716974 (1 of 1) K02954 - small subunit ribosomal protein S14 (RP-S14, MRPS14, rpsN); 30S ribosomal protein S14 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTCAAATAAAAGAAGGATGACTTGGTACATGTCCCTACTCGGAAGGAG
Internal bar code:AGAGTGTCCAAGGAAGTATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:84
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACCTGTGTCCAACCAA
Suggested primer 2:GCGGTACCACTGCCACTAAT