Insertion junction: CLIP2.076486_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.076486
Chromosome:chromosome 8
Location:1711121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g366250 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCACAGGTGCGCCTGCGTGGCGCAGACGAGCCGGATGCCAGTCCTGG
Internal bar code:GAAGACTGATCAGGGCTTATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1322
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AACGGTTGCGGTGAGTGTAT
Suggested primer 2:TAGCAGTCGGACAAACCACC