Insertion junction: CLIP2.076495_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076495
Chromosome:chromosome 6
Location:5163730
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g283450 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAACCGTGTCGTCACTGTCTCACTGAGAGGCAGCTGGACGTACGATTG
Internal bar code:ACCATTGGGCGCGTTCAAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5901
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGGGAGGGCATGGGAATG
Suggested primer 2:CCGCCCTGTGATGATGATCA