Insertion junction: CLIP2.076498_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.076498
Chromosome:chromosome 9
Location:359370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre18.g750047 FMG1,FMG1-1,FMG1A,FMG1-A Flagella Membrane Glycoprotein 1A CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCGCACGTGGGCGTGGCGGCTTCCGCGTCGCAGGTAGCCGTCTTGCT
Internal bar code:GATAGCACGCGCCATGCAGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1501
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTAGTACTGCTACCACGG
Suggested primer 2:CTCTGGCCGGACTTGATGTT