Insertion junction: CLIP2.076500_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.076500
Chromosome:chromosome 14
Location:1803895
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre14.g619550 POA7 (1 of 1) K02727 - 20S proteasome subunit alpha 7 (PSMA3); 20S proteasome alpha subunit G 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCTGCAGGCGGGGCTCCTTCGCTCCCTGTCTGTCAGCCTTCGTCACA
Internal bar code:ACAAAGTTTCAACTCTAGACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1063
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCTGCCCTCTGCTATCG
Suggested primer 2:GGCTGCTCCCTTGGATTTCT