Insertion junction: CLIP2.076503_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076503
Chromosome:plastome
Location:170609
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802326 psaJ,2716958,ChreCp061 photosystem I subunit IX; (1 of 1) K02697 - photosystem I subunit IX (psaJ) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTTAACATTAACTAAGCTTAATGCATTAAGCAATTCACTCTTTACGCA
Internal bar code:TGTCGTCAGATCGCAGGAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:296
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CACGACGTTGTGGACAAGAT
Suggested primer 2:CTATGTAGAACCAGCGGCGT