Insertion junction: CLIP2.076504_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076504
Chromosome:chromosome 12
Location:1397529
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488800 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTCATGGCATGGGTGCGGGGCGCCCCTGCTGGTCGGCCTGAACCTT
Internal bar code:TTAGTTTAGGTGGTTTGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3036
LEAP-Seq percent confirming:60.3774
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGTGGAATCAGTGGACG
Suggested primer 2:TTTTTGAGTTGCCTGTCGCG