Insertion junction: CLIP2.076509_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.076509
Chromosome:chromosome 13
Location:163197
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g563100 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGCTGGATTCTGTCTCACGGTCTCGCTAGCCGGCAGTGGCAACCCTTC
Internal bar code:ATAGCCTACCCGCGGTACGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1816
LEAP-Seq percent confirming:73.0769
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCTGGAAGTCACCGAATG
Suggested primer 2:TGAAGACGTCCATGGAGCAC