Insertion junction: CLIP2.076511_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076511
Chromosome:chromosome 3
Location:9115897
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g200879 CSR10 Carbohydrate sulfotransferase-related 10; (1 of 1) IPR000104//IPR000863//IPR012884//IPR027417 - Antifreeze protein, type I // Sulfotransferase domain // Excisionase-like // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGGGGGGCAGCGGGGAGGGGTTTCGAGAGGCTGGTGGAGGTATGACGG
Internal bar code:TTGGGTATTTGATGTGCTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:135
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTGCGACAACAACCTTG
Suggested primer 2:TTAGTACAGTGCGTGCGTGT