Insertion junction: CLIP2.076529_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.076529
Chromosome:chromosome 16
Location:1180557
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650550 FAP103 Flagellar Associated Protein 103; (1 of 4) K00940 - nucleoside-diphosphate kinase (ndk, NME) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCATGCTGCCCGATACAGAGTTACAGTGCCCTCCACGGGTGCGACAT
Internal bar code:TATTAGCGATCGCCATATGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1895
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTAGTCTGGTGCTGTTG
Suggested primer 2:ACTATGGCGAAGAGTCTGCG