Insertion junction: CLIP2.076548_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.076548
Chromosome:plastome
Location:131740
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802319 2717001,ChreCp055,rps11 30S ribosomal protein S11; (1 of 1) IPR019981 - Ribosomal protein S11, bacterial-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATTGAAAATCCCAAAAAAGTAAAGAAATTTATATGTCAAAAAACCTGT
Internal bar code:GGGTGCGAATGGGTTAGCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:87
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTGATAGGCGAGGCAAC
Suggested primer 2:AAACCGGACTCCGTTGTTGT