Insertion junction: CLIP2.076553_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076553
Chromosome:chromosome 9
Location:3552257
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396587 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTAGTGTGTGTGGTGGTTCGTGAGAAAATGATATTTGCGATTGCAAGA
Internal bar code:AGGAAATAAACATGGAGATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:424
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCCTCATCCACCTCCTC
Suggested primer 2:CGGGTTGCAAAAGGTTGGAG