Insertion junction: CLIP2.076553_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.076553
Chromosome:chromosome 9
Location:3552261
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396587 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACACCGACGCCGCTGCTGCCGCCGCCACATCAGGCGGGATCGTAGCC
Internal bar code:AGGAAATAAACATGGAGATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2330
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGTTGCAAAAGGTTGGAG
Suggested primer 2:ACCTCCTCATCCACCTCCTC