Insertion junction: CLIP2.076568_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076568
Chromosome:chromosome 4
Location:1252918
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215000 BKT,CBK1,BKT1 Beta-carotene ketolase; (1 of 1) IPR000104//IPR005804 - Antifreeze protein, type I // Fatty acid desaturase domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTCTCCCTGCACTCAGTGCAACACACTTCCCTGCAGCACCGCGGCCA
Internal bar code:CATTAGGTTAGACGTGCGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:951
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTACCGTGTCTGTTCACA
Suggested primer 2:CCGTTGGCAGCACATATTCG