Insertion junction: CLIP2.076569_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076569
Chromosome:chromosome 6
Location:6270038
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292450 PUS13 RNA pseudouridine synthase; (1 of 1) 5.4.99.44 - Mitochondrial tRNA pseudouridine(27/28) synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGGATGCAAAGCTGCCAGGTTATGATTTGGCGGAGTTATGCACTGAG
Internal bar code:AGGTCCAGCCCCGTCAGATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2217
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGTGAGCATGGCCGTTG
Suggested primer 2:AGGCGTTTAAACTCCGGGAG