Insertion junction: CLIP2.076569_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076569
Chromosome:chromosome 6
Location:6270082
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292450 PUS13 RNA pseudouridine synthase; (1 of 1) 5.4.99.44 - Mitochondrial tRNA pseudouridine(27/28) synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTTCTGCGGCGGCGGCTGGCCCTCGCCCTCCCCTGCCACCGACTCAG
Internal bar code:AGGTCCAGCCCCGTCAGATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1888
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCGTTTAAACTCCGGGAG
Suggested primer 2:TTTTGTGAGCATGGCCGTTG