Insertion junction: CLIP2.076572_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076572
Chromosome:chromosome 9
Location:5707853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410450 ROC15,ROC74 Rhythm Of Chloroplast 15; (1 of 4) IPR001005//IPR006447//IPR009057//IPR017930 - SANT/Myb domain // Myb domain, plants // Homeodomain-like // Myb domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGTAAGATTTGCTGGGAAGCGATAGTGGTGCTGCAGGCACGGGCGAG
Internal bar code:CGTGCGCGATCTAAAACGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4445
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAACAGTGTTGGTGGAAG
Suggested primer 2:TTGCTTGCATCTCCGTGTCT