Insertion junction: CLIP2.076572_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076572
Chromosome:plastome
Location:63101
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802290 ChreCp026,2716975,psbM photosystem II protein M; (1 of 1) K02714 - photosystem II PsbM protein (psbM) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTTTCTGTATAACCGCTAAATAGAAATGAAAGCTTTGCAGTTGAATA
Internal bar code:ACGTTCTTTGTCCTCTATCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:55
LEAP-Seq percent confirming:2.5641
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGACCCACTTTGCTCCCT
Suggested primer 2:GTTTCCCCTTCCCCTTACGG