Insertion junction: CLIP2.076577_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.076577
Chromosome:chromosome 12
Location:4351231
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g519180 EFT1a,PSRP7,EFT1 Chloroplast elongation factor Ts-like protein; (1 of 1) K02357 - elongation factor Ts (tsf, TSFM) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGACAACAGCCTTGCTGCTTCACTCCTGCCGCCTCCATGTCCGCTCCC
Internal bar code:GGAGTAGTGATGTGAGTATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3177
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GAACGACATGGAGAAGGCCA
Suggested primer 2:ACCGCACATGCTGTTAGGAA