Insertion junction: CLIP2.076581_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076581
Chromosome:chromosome 13
Location:1374286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571750 (1 of 1) PTHR10050 - DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTAGAATGTTGCAAACAGGGCTCAAGTCGCCCTGTAACTATGTAACT
Internal bar code:ATTTAAATGGGACGCCCCAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4857
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:110
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAATTGCGCCCCTGTCAT
Suggested primer 2:ATGACCTGGCATAGCGATGG