Insertion junction: CLIP2.076582_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076582
Chromosome:chromosome 9
Location:1135697
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g800995 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCTCGACTGCCCGGAAGCTCGCCCTCTCTGTCCTAATGCCTGCTGGA
Internal bar code:AGGGCCTTCAAGGGGCTTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1615
LEAP-Seq percent confirming:23.5294
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTGTGTCGTTGTTGAAG
Suggested primer 2:TGGGATAGCACCGTAGTCCA