Insertion junction: CLIP2.076582_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076582
Chromosome:chromosome 9
Location:1135700
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g800995 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCACGGACGTTCGTGGGCTGTCGCCAGCGCAGGTGCTGGCACGGATGT
Internal bar code:ACTTGTATCACTGTGAACCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:6539
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGATAGCACCGTAGTCCA
Suggested primer 2:CGCCTGTGTCGTTGTTGAAG