Insertion junction: CLIP2.076583_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076583
Chromosome:chromosome 9
Location:3047041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393728 (1 of 3) K05302 - SET domain-containing protein 6 (SETD6) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCTGCCTACCGCTCCACCAGGCATCCACCCGCGCACGCCTCTACTGT
Internal bar code:AGACATAGCAAAACCGATAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1521
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AACCTTTCATGCGGGGTGAT
Suggested primer 2:TGCGTGCACACTCATTGTTG