Insertion junction: CLIP2.076583_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076583
Chromosome:chromosome 9
Location:3047052
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393728 (1 of 3) K05302 - SET domain-containing protein 6 (SETD6) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATAAGGGATCGTATATGCGGATTGCCAAACAACTGAGTGCCGCGGGGGA
Internal bar code:GGGAGGGCGGGCTCTGTCAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2182
LEAP-Seq percent confirming:65.2174
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:115

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTGCACACTCATTGTTG
Suggested primer 2:AACCTTTCATGCGGGGTGAT