Insertion junction: CLIP2.076589_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076589
Chromosome:chromosome 16
Location:5380039
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683200 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGACGCAATGGCTCTCGACAACGTCCTGTTCGAGCTCAGGCACTCGGAG
Internal bar code:GAGACGTTTGAAGCTGTTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1411
LEAP-Seq percent confirming:76.6667
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TACACACGAACTCAGTGCCC
Suggested primer 2:CCAGGAACCCAGTGTGGTAC