Insertion junction: CLIP2.076591_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076591
Chromosome:chromosome 16
Location:6068128
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677800 (1 of 1) PTHR21530//PTHR21530:SF1 - PHEROMONE SHUTDOWN PROTEIN // TRAB FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGCCAGCCAGGGGTTCCGCCGTTCCCCTGCCGCATGACCCTCCCCTG
Internal bar code:GAGGTACATTTGCTGGCAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1779
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACCAAACCCCAACTCAC
Suggested primer 2:TGAGGACTAGTTGAGCCCGA