Insertion junction: CLIP2.076600_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076600
Chromosome:chromosome 16
Location:4395749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668400 (1 of 1) PTHR23354//PTHR23354:SF72 - NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED // PROTEIN LMD-3, ISOFORM A 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCTCAGGCACCCGGCATCTACACATGCGTAGATGACCCTGACCGCGG
Internal bar code:CACGACGGTGTTCATCATTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1397
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGGGGGAAGTGAGTGTG
Suggested primer 2:TCCCATCAGATGCGGTATGC