Insertion junction: CLIP2.076613_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076613
Chromosome:chromosome 17
Location:1416762
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g706300 XPD1,RAD3C (1 of 1) K10844 - DNA excision repair protein ERCC-2 (ERCC2, XPD); RAD3/XP-D family DNA-binding helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGTTAGTGTGTCCGGTGTGTGTGACAATAAGCACAAGGACCAGAAAC
Internal bar code:ATATTGTATTCATGGTAAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:239
LEAP-Seq percent confirming:54.8387
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCTACTGCACACGAACC
Suggested primer 2:CTCCATCTCCACATCTCCGC