Insertion junction: CLIP2.076624_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076624
Chromosome:chromosome 12
Location:2295644
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g508250 (1 of 1) PTHR22975:SF9 - F6D8.33-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGGTGCGCTGCACGCAGAAGGGCTGCGACAAGACCACGCACCGGCT
Internal bar code:GAGTTGTGGTAGCTAGGTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:157
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGACAGAAACGCTAGGC
Suggested primer 2:GGCGAGTACAACTGCTTCCT