Insertion junction: CLIP2.076628_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.076628
Chromosome:chromosome 7
Location:5466286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351000 WWP1 (1 of 1) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40); Protein with WW and FF domains 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAACTTTGAATAGGGGCCGTGTGACTAACACCGGAGTCCGGGAGCTGAC
Internal bar code:TTATTGATTTTTATTAGTCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2601
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCCGCCGGAAATTATGG
Suggested primer 2:GACCGTTGCACTGTGTGTTC