Insertion junction: CLIP2.076629_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076629
Chromosome:chromosome 16
Location:4028288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690000 HPAT2,CGL147 Hydroxyproline O-arabinosyl transferase 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTGGCATGTCAGATGGCATACGACAACCGACGATCAATGTTGGCACG
Internal bar code:GGTATGGAGTGTTGCTGCGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1059
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCAAGGTGAACAAGTGCG
Suggested primer 2:CGGGCTCGCTACTCAGAAAT