Insertion junction: CLIP2.076636_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076636
Chromosome:chromosome 10
Location:40129
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g417650 (1 of 1) 2.1.1.207 - tRNA (cytidine(34)-2'-O)-methyltransferase / tRNA methyltransferase L 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGGTGACGAGCACCACCAACAGCAGCAGTGGCAGTCAAAATGCCGGC
Internal bar code:TATGGTATATCGGGCGCCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3105
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGACGAGTCGTTGTGGT
Suggested primer 2:GGGAGCTAATACATGGCGCT