Insertion junction: CLIP2.076636_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.076636
Chromosome:chromosome 10
Location:40142
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g417650 (1 of 1) 2.1.1.207 - tRNA (cytidine(34)-2'-O)-methyltransferase / tRNA methyltransferase L 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTATCGGGAGGGAGTTACTGTATTGACGAGTCGCGGGCGTACTGGCAGG
Internal bar code:TATGGTATATCGGGCGCCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2967
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGCTAATACATGGCGCT
Suggested primer 2:GAGTGACGAGTCGTTGTGGT