Insertion junction: CLIP2.076640_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076640
Chromosome:plastome
Location:25210
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802275 rps19,ChreCp013,2717056 30S ribosomal protein S19; (1 of 1) K02965 - small subunit ribosomal protein S19 (RP-S19, rpsS) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGAGCTTTTTAAATTCCACATTAAATTGAAATTTATTGGAATTTTTC
Internal bar code:ACGTACAGAGTACTGTCCGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:85
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCGTCCAGTTACACCATG
Suggested primer 2:GAGGATGGTAGTGGCAGCTC