Insertion junction: CLIP2.076644_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076644
Chromosome:chromosome 12
Location:7732803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554700 SEC22 Qb-SNARE protein, Sec20-family; (1 of 1) K08517 - vesicle transport protein SEC22 (SEC22) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAAGCCGCAGTCACCACTTGCAACTCAAGAACCGCCAAAACTTGCAC
Internal bar code:TCGCTGGAAGTGATATCCGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1090
LEAP-Seq percent confirming:65.3846
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGAACTTGATGAAGGCGT
Suggested primer 2:TTACGCACACCACTGGTCTC