Insertion junction: CLIP2.076645_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076645
Chromosome:chromosome 2
Location:2306502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090500 HEL10 (1 of 1) K13131 - ATP-dependent RNA helicase DDX20 (DDX20, GEMIN3); DEAD box ATP-dependent RNA helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCCCTCTCTGCTCTCCCAACCCCACAACGGACAGGGTGTTCCCGGGG
Internal bar code:TTCCCCTTCCATGTTCTAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1823
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCTGGCCACAGGGATTG
Suggested primer 2:GCGGCAGTCGTGATCTATGA