Insertion junction: CLIP2.076649_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076649
Chromosome:chromosome 3
Location:2204474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157300 CAF1 (1 of 1) K12581 - CCR4-NOT transcription complex subunit 7/8 (CNOT7_8, CAF1, POP2); CCR4-associated factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTGAGATGCCGGCACTGTCGTGACACCAAAACCACGTGAATCAAATGT
Internal bar code:GTTGGATTACCAATTCTGCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4412
LEAP-Seq percent confirming:96.7213
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGGGAGCGATCAGGATG
Suggested primer 2:AGCTTCTCGGACAGGAGACT