Insertion junction: CLIP2.076651_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076651
Chromosome:chromosome 10
Location:2815576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438850 ROC76 (1 of 10) PF00170 - bZIP transcription factor (bZIP_1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTTGGGCGCTCTGGTGCTGCGTCGGGGCTCATGTCAGCACGCCGACGT
Internal bar code:GTTTTCCGTCTAACTCTCCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2227
LEAP-Seq percent confirming:63.1579
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTGAGCCCTGTCAGGAAC
Suggested primer 2:GCAAGCCCTTGTGCTGTTAC