Insertion junction: CLIP2.076662_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076662
Chromosome:chromosome 9
Location:1113946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401650 gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTTCCGACCCATCCGCTCTCGTGGCACTCCGTCGTTGACATTCAGTA
Internal bar code:CGAATGAAAAGGTGGGCCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:772
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAACGGCAAATCAACCT
Suggested primer 2:GGGAAGGGGTCAAATGAGGG