Insertion junction: CLIP2.076662_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076662
Chromosome:chromosome 9
Location:1113957
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401650 gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGACACGGTTTGCGATGGGCTTGACCAGCCGCCGGTCGATGGCTTCTT
Internal bar code:CGAATGAAAAGGTGGGCCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:892
LEAP-Seq percent confirming:11.2903
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:55
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAAGGGGTCAAATGAGGG
Suggested primer 2:GCACAACGGCAAATCAACCT