Insertion junction: CLIP2.076682_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.076682
Chromosome:chromosome 1
Location:2607172
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g015500 CGL91 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED; Conserved in the Green Lineage 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCAGAGCGTCAAGTGGCAATGTTGCTTGTTAGTTGTTCTTCTCTGAGT
Internal bar code:TATGGCCGGGTCAGGTGGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:871
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGGGAGATTGTGTGGGG
Suggested primer 2:GCAAGCACGCAAAACAAACC