Insertion junction: CLIP2.076695_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076695
Chromosome:chromosome 1
Location:6001235
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800109 (1 of 1) PTHR19331//PTHR19331:SF299 - LYSYL OXIDASE-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACGGGAGACTCGCTCCCTTGTCAACCTAGGCGACAATCCTCTTGTTAC
Internal bar code:TTTTCGGTGTCTTGCTTTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:941
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTACGTGTACGATGGCA
Suggested primer 2:GGGGCAGTGCTCAGAATCTT