Insertion junction: CLIP2.076698_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076698
Chromosome:chromosome 9
Location:781532
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404050 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATCCCCGGGCAATGCAAGCTAATCATTGGTTGGCTCCCGTGAAACGTT
Internal bar code:TAGTACCGCTAAGTTGTCGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1730
LEAP-Seq percent confirming:51.4706
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCTGTGTGGTGCTATCGC
Suggested primer 2:AGCCATACCCGTCATTGCAA