Insertion junction: CLIP2.076701_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.076701
Chromosome:chromosome 6
Location:8623436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g309850 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCATACCCGCTGAAGGACGGGCGCATGCAGATTGCAGAGGGCAGATCC
Internal bar code:TGTAAGTTCATGTTTGGACCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1755
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGCTCTGACATTCGCTT
Suggested primer 2:CACTTTGAGCACACCTGCAC