Insertion junction: CLIP2.076721_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.076721
Chromosome:chromosome 12
Location:621641
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g493550 THK3 Thymidine kinase; (1 of 1) PTHR11652//PTHR11652:SF1 - 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER // 28S RIBOSOMAL PROTEIN S12, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACAAAAAGCCAGGACCGTCTGAGTGGCGAGGAGGGAGACGAGGCGACA
Internal bar code:ATCGTTGGATAAGAGTATGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1342
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTGAGAGCCGATGGTTT
Suggested primer 2:GAGGTAACACTGGCATGGCT